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789 Commits

Author SHA1 Message Date
Zygo Blaxell
48aac8a99a bees: drop unused constants
BLOCK_SIZE_MIN_EXTENT_DEFRAG, BLOCK_SIZE_MIN_EXTENT_SPLIT, and others
are no longer used.  Remove them.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit a3d7032edaf5fc584412d0dcf8773f1cafa8f2dc)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
b0ba4c4f38 bees: time tmpfile create and copy operations
Add time spent in file create and copy operations to the stats.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit f01c20f97269083175a74d1a1fd3ebaced2d9560)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
74d256f0fe bees: handle trace functions that throw exceptions
A BEESTRACE closure could throw an exception.  Trap those so we don't
end up in terminate().

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit 59660cfc00b9ca233eeb1a7cdf6df34a45a2deba)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
8cde833863 bees: make a thread note when we read data
Reads can block indefinitely due to bugs, low io priority, or poor
storage performance.  Record the block origin data in the thread state
so we can see which reads are problematic.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit f56f736d28970a0f03ee887a5bd5515cc749d413)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
e0951ed4ba bees: use C++11 syntax for constant initializers
This lets us use more default constructors.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit 8a932a632ff4602a0357ed5fbcd3f86b6bc50283)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
c479b361cd bees: remove file open serialization mutex
It is no longer necessary.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit 5c9104555768801701df15f512c4d3d7c579398b)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
c6c3990d19 bees: types: improve serialization of byte ranges
Use () instead of [] when the respective end of the byte range touches
the beginning or end of the file.  Also omit the '0' at beginning of
file.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit 3023b7f57a3003242bc770bcfe55f666227680ff)
2017-06-17 10:15:11 -04:00
Zygo Blaxell
3fdc217b4f bees: change formatting for physical bytenr ranges in dedup
Use a different character to make it easier to search for bytenr ranges
in the logs.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit d43199e3d6e6469264eb10de8b0a783f8573e0e8)
2017-06-17 10:15:08 -04:00
Zygo Blaxell
6c8d2bf428 bees: limit FD cache size explicitly
This will allow the default size limit for cache objects to be changed
with impunity.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit 9daa51edaab44c02ce0917ff94b20683036d7594)
2017-06-17 10:15:08 -04:00
Zygo Blaxell
d6f97edf4a crucible: fs: keep ioctl buffer between runs
perf blames the SEARCH_V2 ioctl wrapper for a lot of time spent in malloc.
Use a thread_local buffer for ioctl results, and reuse it between runs.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit e509210428951e645d33916694a17aed1950991d)
2017-06-17 10:15:08 -04:00
Zygo Blaxell
312254a47b crucible: cache: no need to use explicit lock type
C++11 'auto' keyword is sufficient.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
(cherry picked from commit 44fedfc928a5ac6b8040fd94907954f0f2f806f1)
2017-06-17 10:14:25 -04:00
Timofey Titovets
5350b0f113 Bees: fix [-Werror=implicit-fallthrough=]
In gcc 7+ warning: implicit-fallthrough has been added
In some places fallthrough is expectable, disable warning

Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
v0.4
2017-06-13 18:05:38 +03:00
Zygo Blaxell
5a3f1be09e Merge git://github.com/Nefelim4ag/bees 2017-02-09 20:01:29 -05:00
Timofey Titovets
4b592ec2a3 Check: if disk with UUID are btrfs by blkid
Old check can't find btrfs fs, if fs not mounted

Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2017-02-09 11:56:31 +03:00
Zygo Blaxell
dc00dce842 context: purge FD cache every COMMIT_INTERVAL
Holding file FDs open for long periods of time delays inode destruction.
For very large files this can lead to excessive delays while bees dedups
data that will cease to be reachable.

Use the same workaround for file FDs (in the root_ino cache) that
is used for subvols (in the root cache):  forcibly close all cached
FDs at regular intervals.  The FD cache will reacquire FDs from files
that still have existing paths, and will abandon FDs from files that
no longer have existing paths.  The non-existing-path case is not new
(bees has always been able to discover deleted inodes) so it is already
handled by existing code.

Fixes: https://github.com/Zygo/bees/issues/18

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-02-08 22:01:00 -05:00
Timofey Titovets
82b3ba76fa Makefile: make service install compatible with debian systems
Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2017-01-30 05:29:28 +03:00
Zygo Blaxell
4113a171be crucible: cache: clean up use of iterators
check_overflow() will invalidate iterators if it decides there are too
many cache entries.

If items are deleted from the cache, search for the inserted item again
to ensure the iterator is valid.

Increase size of timestamp to size_t.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-23 21:12:34 -05:00
Zygo Blaxell
5713fcd770 bees: clean up statistics class
Some whitespace fixes.  Remove some duplicate code.  Don't lock
two BeesStats objects in the - operator method.

Get the locking for T& at(const K&) right to avoid locking a mutex
recursively.  Make the non-const version of the function private.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-22 22:00:28 -05:00
Zygo Blaxell
db8ea92133 bees: fix further instances of copy-after-unlock bug
Before:

        unique_lock<mutex> lock(some_mutex);
        // run lock.~unique_lock() because return
        // return reference to unprotected heap
        return foo[bar];

After:

        unique_lock<mutex> lock(some_mutex);
        // make copy of object on heap protected by mutex lock
        auto tmp_copy = foo[bar];
        // run lock.~unique_lock() because return
        // pass locally allocated object to copy constructor
        return tmp_copy;

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-22 22:00:27 -05:00
Zygo Blaxell
6099bf0b01 crucible: fix further instances of copy-after-unlock bug
Before:

	unique_lock<mutex> lock(some_mutex);
	// run lock.~unique_lock() because return
	// return reference to unprotected heap
	return foo[bar];

After:

	unique_lock<mutex> lock(some_mutex);
	// make copy of object on heap protected by mutex lock
	auto tmp_copy = foo[bar];
	// run lock.~unique_lock() because return
	// pass locally allocated object to copy constructor
	return tmp_copy;

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-22 22:00:27 -05:00
Zygo Blaxell
c58e5cd75b crucible: cache: construct return value before releasing lock
If we release the lock first (and C++ destructor order says we do), then
the return value will be constructed from data living in an unprotected
container object.  That data might be destroyed before we get to the
copy constructor for the return value.

Make a temporary copy of the return value that won't be destroyed by any
other thread, then unlock the mutex, then return the copy object.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-22 12:15:07 -05:00
Paul Jones
123d4e83c5 Remove reference to *.c files in Makefile
On Gentoo it errors out because there is no *.c


Signed-off-by: Paul Jones <paul@pauljones.id.au>
2017-01-22 16:49:50 +11:00
Zygo Blaxell
5de3b15daa src: Update bees-version.c more often
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-18 22:17:03 -05:00
Zygo Blaxell
38fffa8e27 lib: add a version string
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-18 22:17:02 -05:00
Zygo Blaxell
50417e961f crucible: rework the Resource class
Get rid of the ResourceHolder class.

Fix GCC static template member instantiation issues.

Replace assert() with exceptions.

shared_ptr can't seem to do reference counting in a multi-threaded
environment.  The code looks correct (for both ResourceHandle and
std::shared_ptr); however, continual segfaults don't lie.

Carpet-bomb with mutex locks to reduce the likelihood of losing shared_ptr
races.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-18 22:09:18 -05:00
Zygo Blaxell
6cc9b267ef crucible: time: fix uninitialized member
Found by valgrind.  It was mostly harmless because the range of
usable values is limited by m_burst (which was initialized) and 0.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-16 22:02:14 -05:00
Zygo Blaxell
9f120e326b bees: fix deadlock in thread status reporting
"s_name" was a thread_local variable, not static, and did not require a
mutex to protect access.  A deadlock is possible if a thread triggers an
exception with a handler that attempts to log a message (as the top-level
exception handler in bees does).

Remove multiple unnecessary mutex locks.  Rename the thread_local variables
to make their scope clearer.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-15 01:55:34 -05:00
Zygo Blaxell
382f8bf06a hash: prevent eleventy-gigabyte core dumps
Add MADV_DONTDUMP to the list of advice flags.

There are now three flags which may or may not be supported by the
target kernel.  Try each one and log its success or failure separately.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-12 22:55:08 -05:00
Zygo Blaxell
5e91529ad2 hash: remove the unused m_prefetch_rate_limit
The hash table statistics calculation in BeesHashTable::prefetch_loop
and the data-driven operation of the extent scanner always pulls the
hash table into RAM as fast as the disk will push the data.  We never
use the prefetch rate limit, so remove it.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-11 21:15:12 -05:00
Zygo Blaxell
bddc07bd28 hash: make thread status message more consistent
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-11 21:15:12 -05:00
Zygo Blaxell
ffe2a767d3 crucible: extentwalker: add compressed() and bytenr() methods
Also use C++11 syntax for construction.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-11 21:15:11 -05:00
Zygo Blaxell
845267821c main: count arguments correctly
Replace one braindead mistake for another.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-10 01:10:38 -05:00
Zygo Blaxell
3138002a1f main: ArgList would silently drop the first argument
This fixes a bug where bees tries to process itself as a btrfs filesystem.
This is a species of bug that I only notice *after* pushing to a public
git repo.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-09 23:42:02 -05:00
Zygo Blaxell
4a57c5f499 README: update copyright year, remove some obsolete statements 2017-01-09 23:32:33 -05:00
Zygo Blaxell
bda4638048 crucible: LockSet: add a maximum size constraint
Extend the LockSet class so that the total number of locked (active)
items can be limited.  When the limit is reached, no new items can be
locked until some existing locked items are unlocked.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-09 23:23:51 -05:00
Zygo Blaxell
fa8607bae0 crucible: get rid of DefaultBool, just use C++11 initializer syntax
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-09 23:23:32 -05:00
Zygo Blaxell
1b261b1ba7 build: move BEES_VERSION to a separate C file to avoid unnecessary building
Every git commit was causing bees.cc and bees-hash.cc to be rebuilt,
which was expensive and unnecessary.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-09 23:23:05 -05:00
Zygo Blaxell
6980935463 README: "btrfs: improve delayed refs iterations" has been merged into v4.10-rc1
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-09 00:05:18 -05:00
Zygo Blaxell
cf04fb17de crucible: remove unused execpipe
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-08 23:45:05 -05:00
Zygo Blaxell
4a9f26d12e crucible: remove ArgList and drop the unimplemented interpreter classes
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-08 23:45:05 -05:00
Zygo Blaxell
e8eaa7e471 trivial: mass purge of whitespace errors
Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2017-01-06 22:14:50 -05:00
Timofey Titovets
22e601912e Make filters configurable
Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2016-12-30 04:26:42 +03:00
Timofey Titovets
badfa6e9b9 Add filter to remove time from bees output
Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2016-12-29 17:04:47 +03:00
Timofey Titovets
03609f73db Add help section to Makefile
Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2016-12-29 13:40:13 +03:00
Timofey Titovets
7f92f22dea Add install_scripts subcommand to make
Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2016-12-29 13:30:08 +03:00
Timofey Titovets
f7c71a7a25 Add install subcommand to make
Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2016-12-29 13:27:47 +03:00
Timofey Titovets
37713c2dd4 Scripts: Remove code for short path name in log
Commit: "log: remove path from thread name" remove path from logs, so this useless

Signed-off-by: Timofey Titovets <nefelim4ag@gmail.com>
2016-12-29 13:14:17 +03:00
Zygo Blaxell
65a950bc41 README.md: 32-bit hosts work now v0.3 2016-12-27 18:01:30 -05:00
Zygo Blaxell
ef8d92a3cb resolve: don't stop at the first physical address lookup failure
The btrfs LOGICAL_INO ioctl has no way to report references to compressed
blocks precisely, so we must always consider all references to a
compressed block, and discard those that do not have the desired offset.

When we encounter compressed shared extents containing a mix of unique
and duplicate data, we attempt to replace all references to the mixed
extent with the same number of references to multiple extents consisting
entirely of unique or duplicate blocks.  An early exit from the loop
in BeesResolver::for_each_extent_ref was stopping this operation early,
after replacing as few as one shared reference.  This left other shared
references to the unique data on the filesystem, effectively creating
new dup data.

The failing pattern looks like this:

    dedup: replace 0x14000..0x18000 from some other extent
    copy: 0x10000..0x14000
    dedup: replace 0x10000..0x14000 with the copy
    [may be multiple dedup lines due to multiple shared references]
    copy: 0x18000..0x1c000
    [missing dedup 0x18000..0x1c000 with the copy here]
    scan: 0x10000 [++++dddd++++] 0x1c000

If the extent 0x10000..0x1c000 is shared and compressed, we will make
a copy of the extent at 0x18000..1c0000.  When we try to dedup this
copy extent, LOGICAL_INO will return a mix of references to the data
at logical 0x10000 and 0x18000 (which are both references to the
original shared extent with different offsets).  If we break out
of the loop too early, we will stop as soon as a reference to 0x10000
is found, and ignore all other references to the extent we are trying
to remove.

The copy at the beginning of the extent (0x10000..0x14000) usually
works because all references to the extent cover the entire extent.
When bees performs the dedup at 0x14000..0x18000, bees itself creates
the shared references with different offsets.

Uncompressed extents were not affected because LOGICAL_INO can locate
physical blocks precisely if they reside in uncompressed extents.

This change will hurt performance when looking up old physical addresses
that belong to new data, but that is a much less urgent problem.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2016-12-27 15:23:40 -05:00
Zygo Blaxell
6e7137f282 bees: work around btrfs fsync bug
btrfs provides a flush on rename when the rename target exists, so the
fsync is not necessary.  In the initialization case (when the rename
target does not exist and the implicit flush does not occur), the file
may be empty or a hole after a crash.  Bees treats this case the same
as if the file did not exist.  Since this condition occurs for only the
first 15 minutes of the lifetime of a bees installation, it's not worth
bothering to fix.

If we attempt to fsync the file ourselves, on a crash with log replay,
btrfs will end up with a directory entry pointing to a non-existent inode.
This directory entry cannot be deleted or renamed except by deleting
the entire subvol.  On large filesystems this bug is triggered by nearly
every crash (verified on kernels up to 4.5.7).

Remove the fsync to avoid the btrfs bug, and accept the failure mode
that occurs in the first 15 minutes after a bees install.

Signed-off-by: Zygo Blaxell <bees@furryterror.org>
2016-12-27 15:20:31 -05:00